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研究生: 林旻儀
Min-I Lin
論文名稱: 台灣地區外來種亞洲錦蛙(Kaloula pulchra)族群遺傳結構及來源之研究
A study on the Origin and Population Genetic Structure of Asiatic Painted Frog (Kaloula pulchra) in Taiwan
指導教授: 呂光洋
Lue, Kuang-Yang
學位類別: 碩士
Master
系所名稱: 生命科學系
Department of Life Science
論文出版年: 2007
畢業學年度: 95
語文別: 中文
論文頁數: 46
中文關鍵詞: 族群遺傳結構亞洲錦蛙創始者效應
英文關鍵詞: Population Genetic Structure, Kaloula pulchra, founder effect
論文種類: 學術論文
相關次數: 點閱:313下載:77
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摘要:

亞洲錦蛙(Kaloula pulchra)原產的東南亞地區,為台灣最近才發現的狹口蛙科種類。目前在台灣的核心分布範圍在鳳山水庫附近約 40 平方公里的區域,核心區外有三處不連續分布的地點(屏東科技大學、高雄縣美濃鎮與杉林鄉)。亞洲錦蛙在大多數發現地點都有生殖族群,其體型大且生長快速,未來極有可能繼續向外擴張,且對本地生態產生衝擊。
為了解台灣地區亞洲錦蛙的來源、侵入台灣的次數以及在台灣島內的族群遺傳結構有,本研究利用PCR以及定序的方式來對於台灣幾個族群以及由香港、海南島、泰國抓取的亞洲錦蛙個體為外群進行族群內以及族群間的分析。從研究中發現,在所取得的所有台灣亞洲錦蛙個體只有一個基因型,而且顯示台灣地區的亞洲錦蛙族群不是來自於鄰近的香港、海南島及中國。這次我們取得美濃地區、鳳山水庫、陸軍官校以及泰國、海南島和香港的亞洲錦蛙的個體進行比較;發現台灣地區的亞洲錦蛙族群基因及核甘酸歧異度都很低,並且與鄰近地區族群沒有很近的親緣關係,推斷台灣地區的亞洲錦蛙確實為近年入侵的外來種而且應是一次入侵,其來源還需要更多其他國家的樣本進行比較分析。

Abstract
Asiatic painted frog belongs to the family Microhylidae, (Kaloula pulchra). Originally distributed in Southeast Asia, it is a newly recorded species in Taiwan. Asiatic painted frog is primarily found distributed within a 40 km2 area around Fongshan Reservoir and also in the other three separate locations in Pingtung and Kaohsiung counties. We suspected that it is possibly as a result of human introduction. Breeding activities of the Asiatic painted frog have been observed in most of the distribution areas. Due to their size and growth advantage relative to the native species forgs in Taiwan, it is likely their continued presence in Taiwan will have a great impact on native species.

To gain a better understanding of the origin, process of introduction, and the population genetic structure of the newly recorded species, I conduct a DNA analysis on the mitochondrial DNA of the Asiatic painted frog in Taiwan and mitochondrial DNA of frogs from other regions by the use of Polymerase Chain Reaction (PCR) and mtDNA sequencing. Results samples indicated that the Taiwanese population was not originate from Hong Kong, Taiwan’s closest neighbor, as the Taiwanese populations showed only one haplotype, which is distinctly different from the population in Hong Kong. For this research, I comparing the genetic structure of the frog populations from three different locations in Taiwan to the specimens from Thailand、Hainan Island 、Hong Kong. We found that there is only little haplotype and nucleotide diversity in Taiwanese population genetic structure is distinctly different from those sampled in Hong Kong, Thailand and Hainan Island. The lack of diversity indicates that the Asiatic painted frog is newly introduction to Taiwan. Furthermore the large genetic distance to those population of neighboring countries indicate that the Taiwanese population is unlikely originated from the foreign samples I analyzed. Further analysis of Kaloula pulchra population from other locations is required to determine origination.

目錄 摘要………………………………………………………………………1 Abstract…………………………………………………………………2 壹、前言…………………………………………………………………3 貳、材料方法……………………………………………………………6 參、結果…………………………………………………………………11 肆、討論…………………………………………………………………13 伍、結論…………………………………………………………………23 陸、參考文獻……………………………………………………………24 表 ………………………………………………………………………30 圖 ………………………………………………………………………41 附錄 ……………………………………………………………………45

Avise, J. C.1989. Gene trees and organismal histories: a phylogenetic approach to population biology. Evolution 43:1192-1208
Avise, J. C. 2000. Phylogeography: The history and formation of species, Harvard college Press. Cambridge, Massachusetts London, England.
Chan-ard, T., W. Grossmann, A. Gumprecht and K.-D. Schulz. 1999. Amphibians and Reptiles of Peninsular Malaysia and Thailand. ISBN : 3980681300.
Davies, N., Villablanca, F. X. & Roderick, G. K. 1999 Determining the source of newly founded populations: multilocus genotyping in nonequilibrium population genetics. Trends in Ecology and Evolution 14, 17-21.
Davis, M. A., J. P. Grime & K. Thompson. 2000. Fluctuating resources in plant communities: a general theory of invisibility. Journal of Ecology 88:528-534.
Farris, J. S. 1989. The retention index and the rescaled consistency index. Cladistics 5:417-9.
Felsenstein 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
Frost, D. R. 2004. Amphibian Species of the World: an Online Reference. Version 3.0 Electronic Database accessible at http://research.amnh.org/herpetology/amphibia/index.html. American Museum of Natural History, New York, USA.
Fu , Y. X. and W. H. Li.1993. Statistical tests of neutrality of mutations. Genetics 133: 693-704
Graur D. and W. H. Li. 2000.Fundamentals of molecular evolution. Sinauer Associates, Inc. U.S.A.
Graur D. and Li, W.-H. 2000 Fundamentals of Molecular Evolution. Sinauer, Sunderland, UK.
Gill, F.B., R.A. Canterbury, and J.L. Confer. 2001. Blue-winged Warbler. The Birds of North America, Inc., Philadelphia, PA.
Hänfling B, Carvalho G.R & Brandl R. (2002) mt-DNA sequences and possible invasion pathways of the Chinese mitten crab. Mar Ecol Prog Ser 238: 307−310.
Hsu, F. H., F. J. Lin, and Y. S. Lin. 2000. Phylogeographic variation in mitochondrial DNA of formosan white-bellied rat Niviventer culturatus. Zoological Studies 39: 38-46.
Hudson, R. R., Slatkin, M. and Maddison, W. P. 1992. Estimation of levels of gene flow from DNA sequence data. Genetics. 132: 583-589.
Inger, 1999, Estudiar el hispanismo a través de un banco de datos. El ejemplo de Juan Goytisolo: Moderna språk , Volume: 1999:1
Karsen, S. J., M. W. N. Lau and A. Bogadek. 1998. Hong Kong Amphibians and Reptiles 2nd edition. Published by the Provisional Urban Council. Hong Kong.
Keane, R. M. and M. Crawley. 2002. Exotic plant invasions and the enemy release hypothesis. TRENDS in Ecology & Evolution 17(4):164-169.
Kluge, A. G., AND J. S. FARRI. 1969. Quantitative phyletics and the evolution of anurans. Syst. Zool., 18:1-32.
Kolar, C. S. and D. M. Lodge. 2001. Progress in invasion biology: predicting invaders. Trends Ecol. Eviol. 16:199-204.
Kolbe, J. J., R. E. Glor, L. R. Schettino, A. C. Lara, A. Larson and J. B. Losos. 2004. Genetic variation increases during biological invasion by a Cuban lizard. Nature 431:177-181.
Kumar, P. S., K. Tamura, and M. Nei. 1993. MEGA: Molecular Evolutionary Genetics Analysis, version 1.01. The Pennsylvania State University, PA.
Kumar, A.M, Murtaugh R, Brown D, Ballas T, Clancy E & Patronek G. Client donation program for acquiring dogs and cats to teach veterinary gross anatomy. JVME 2001;28(2):73-7
Kraus, F., E. W. Campbell, III, A. Allison, and T. Pratt. 1999. Eleutherodactylus frog introductions to Hawaii. Herpetological Review 30(1):21-25.
Lever, C. Lever 2001. The Cane Toad. The History and Ecology of a Successful Colonist, Westbury Academic and Scientific Publishing, Yorkshire (2001).
Lavers, C. 2001. Why Elephants Have Big Ears: Nature’s Engines and the Order of Life. Walnut Tree Publishing Co. Taipei, Taiwan. 320pp.
Lonsdale, W. M. 1999. Global patterns of plant invasions and the concept of invasions and the concept of invisibility. Ecology 80:1522-1236.
Mack, R. N., D. Simberloff, W. M. Lonsdale, H. Evans, M. Clout and F. Bazzaz. 2000. Biotic invasions: causes, epidemiology, global consequences and control. Issues in Ecology 5: 1-19.
Macey, J. R., J. L. S., J. A. Brisson, V. T. Vredenburg, M. Jennings, and A. Larson. 2001. Molecular phylogenetics of western North American frogs of the Rana boylii species group. Mol. Phylogenet. Evol. 19: 131-143.
Margush, T. and F. R. McMorris. 1981. Consensus n-trees. Bulletin of Mathematical Biology 43: 239-244.
Meyer, K., and W. G. Hill. 1991. Mixed model analysis of a selection experiment for food-intake in mice. Genetical Research 57:71–81.
Merila, J. 1996. Genetic variation in offspring condition: an experiment. Functional Ecology 10:465–474.
Muir, C. C., B. M. Galdikas, and A. T. Beckenbach. 2000. mtDNA sequence diversity of orangutans from the islands of Borneo and Sumatra. J. Mol. Evol. 51: 471-480.
Nei, M. and Gojobori, T. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol., 3, 418-426
Nei, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York, NY.
Norval, G., J. J. Mao, H. P. Chu and L. C. Chen. 2002. A new Record of an introduced species, the Brown Anole (Anolis sagrei)(Dumril & Bibron, 1837), in Taiwan. Zoological Studies 41(3):332-336.
Phillips et al., 2004: Bulletin of the American Meteorological Society, 85, 1903-1915.
Pimentel, D. 2002. Introduction: non-native species in the world. In: Pimentel, D. (ed.), Biological invasions: economic and environmental costs of alien plant, animal and microbes species. CRC Press, Boca Raton, FL., USA. pp. 3-8.
Pimentel, D., S. McNair, J. Janecka, J. Wightman, C. Simmonds, C. O’Connel, E. Wong, L. Russel, J. Zerm, T. Aquino and T. Tsomondo. 2001. Economic and environmental threats of alien plant, animal, and microbe invasions. Agr. Ecosyst. Environ. 84: 1-20.
Rodda, G. H., T. H. Fritts and D. Chiszar. 1997. The Appendix 1. List of alien pet reptiles in Taiwan. disappearance of Guam’s wildlife. BioSci. 47: 565-574
Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
Sakai, H., Imamura, C., Osada, Y., Saito, R., Washio, T. and Tomita, M. (2001). Correlation between Shine-Dalgarno sequence conservation and codon usage of bacterial genes. J. Mol. Evol. 52, 164-170.
Shea, K. Chesson, P. (2002) Community ecology theory as a framework for biological invasions. Trends in Ecology and Evolution, 17: 170-176.
Stepien C.A, Taylor C.D & Dabrowska K.A (2002) Genetic variability and phylogeographic patterns of a nonindigenous species invasion: a comparison of exotic versus native zebra and quagga mussel populations. Journal of Evolutionary Biology 15(2): 314–328
Tajima, F. 1989. Statistical methods to test for nucleotide mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
Wang H. Y., M. P. Tsai, M. J. Yu, and S. C. Lee, 1999. Influence of glaciation of divergence patterns of the endemic minnow, Zacco pachycephalus, in Taiwan. Mol. Ecol. 8:1879-1888.
Wang, J. P., K. C. Hsu, and T. Y. Chiang, 2000. Mitochondrial DNA phylogeography of Acrossocheilus paradoxus(Cyprinidae)in Taiwan. Mol. Ecol. 9: 1483-1494
Whittaker, R. 1998. Island Biogeography: Ecology, Evolution and Conservation. Oxford University Press, London, UK. 304pp.
Wilcove, D. S., D. Rothstein, J, Dubow, A. Phillips and E. Losos. 1998. Quantifying threats to imperiled species in the United States. BioSci. 48:607-615.
Williamson, E. G., and M. Slatkin, 1996 Using maximum likelihood to estimate population size from temporal changes in allele frequencies. Genetics 152: 755–761.
Wittenberg, R. and M. J. W. Cock. 2001. Invasive Alien Species. A toolkit of best prevention and management policies. CABI Publishing, Oxfordshire, UK. 228pp.
方引平 2001.台灣麝鼩屬動物之系統分類及親緣地理學研究(食蟲目:尖鼠科)。國立台灣大學動物學研究所 博士論文
呂光洋、杜銘章、向高世 2002台灣兩棲耙行動物圖鑑 大自然雜誌社
李宜欣 2004 臺灣島內緣點白粉蝶與白粉蝶粒線體DNA變異研究 國立臺灣師範大學生命科學系碩士論文
林思民 2003 台灣及鄰近地區草蜥屬的親源關係與親緣地理學研究(有鱗目:蜥蜴科) 國立臺灣師範大學生命科學系博士論文
林容仟、李菁紋、姚正得、李壽先 2005 以核DNA及粒線體DNA片段監測台灣畫眉與大陸畫眉的雜交情形。動物行為與生態2005年聯合學術年會
吳孟修 2001 澎湖地區麗紋石龍子族群遺傳結構研究國立臺灣師範大學生物系碩士論文
梁高賓 2005台灣地區外來種亞洲錦蛙(kaloula pulchra) 族群來源與生態之研究 國立臺灣師範大學生命科學研究所碩士論文
黃鈞漢 2002 以mtDNA D-loop片段探討艾氏樹蛙(溪頭地區)之族群遺傳結構 國立彰化師範大學生物研究所碩士論文。
葉文珊 1997 莫氏樹蛙族群地理親源關係之研究 國立台灣大學動物學研究所碩士論文。
郭瓊華 2002 臺灣蜓蜥族群遺傳結構之研究 國立臺灣師範大學生物系碩士論文
楊懿如 1994 台北樹蛙(Rhacophorus taipeianus)生殖生態與族群基因組成變異 國立台灣大學動物學研究所 博士論文
楊懿如 1998 賞蛙圖鑑 台灣蛙類野外觀察指南-初版 中華民國自然與生態攝影學會 台北 ISBN:957-98940-1-9
蔡長益 1999。以粒線體12S核糖體核酸與細胞色素b序列分析守宮族群親緣關係 國立中山大學生命科學系碩士論文
謝佳男 1993 黑眶蟾蜍(Bufo melanostictus)生殖生態之研究 私立東海大學生物研究所 碩士論文

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