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研究生: 任政宏
JEN, CHENG-HUNG
論文名稱: 設計與合成 1-Deazauridine 的衍生物作為研究 OMP Decarboxylase 機制的探針
Design and Synthesis of 1-Deazauridine Derivatives as Mechanistic Probes for OMP Decarboxylase
指導教授: 簡敦誠
學位類別: 碩士
Master
系所名稱: 化學系
Department of Chemistry
論文出版年: 2008
畢業學年度: 96
語文別: 中文
論文頁數: 111
中文關鍵詞: 核酸脫羧基反應
英文關鍵詞: 1-Deazauridine, OMP Decarboxylase
論文種類: 學術論文
相關次數: 點閱:98下載:0
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  • 本論文第一部分主要是根據 6-cyanouridine 5’-monophosphate (6-CN-UMP) 在 orotidine 5’-monophosphate decarboxylase (ODCase) 催化下轉換成 barbiturate nucleoside 5’- monophosphate (BMP) 的反應,設計以 6-cyano-1,3-dimethyluracil 作為模型反應的起始物,希望藉由其與各種親核試劑反應結果,推測出 ODCase 催化 6-CN-UMP 轉換成 BMP 的可能機制。當 6-cyano-1,3-dimethyluracil 與多種親核試劑反應時,例如 NaOMe, n-BuNH2 等,實驗結果發現會得到六位取代的產物,所以推測 ODCase 催化 6-CN-UMP 轉換成 BMP 的反應也是經由直接取代而產生。

    第二部份則是酵素受質及產物類似物的合成,希望建立系統化的方法合成出 1-deazauridine 的 C-nucleoside 衍生物。我們以 3,5 -dibromo-2,6-dimethoxypyridine 作為起始物,在 n-BuLi 作用下與 ribonolactone 衍生物進行加成反應得到 hemiacetal 衍生物,再利用 Et3SiH 和 BF3 . Et2O 將其去羥基還原得到 ribonucleoside 衍生物, α/β 比例為 1.25/1 , β isomer 以管柱層析分離純化出。將 β form 產物醣上的保護基移除後得到產物 1-(5-bromo-2,6-dimethoxypyridine- 3-yl)-β-D-ribofuranose。後續的去甲基保護,由於產物的不穩定以及純化的困難,未能得到預期的產物。未來希望可以利用合成1-deazauridine 相同的方法合成出更多 1-deazauridine 衍生物。

    Based on the catalytic reaction that orotidine 5’-monophosphate decarboxylase (ODCase) transformed 6-cyanouridine 5’-monophosphate (6-CN-UMP) into barbiturate nucleoside 5’-monophosphate (BMP), we designed 6-cyano-1,3-dimethyluracil as a chemical model and analyzed its reactions toward various nucleophilic conditions. When 6-cyano-1,3- dimethyluracil reacted with some nucleophiles, such as sodium methoxide or n-butylamine, 6-substituded products were obtained, which allowed us to assume that ODCase transformed 6-CN-UMP into BMP through nucleophilic hydrolysis pathway.

    In the second part, we hope to establish a feasible pathway for the synthesis of 1-deazauridine derivatives. 3,5-Dibromo-2,6-dimethoxy- pyridine was treated with n-butyllithium and then reacted with ribonolactone derivative to give the corresponding hemiacetal. The hemiacetal was reductively dehydroxylated with triethylsilane and borontrifluoride ethyletherate to give the ribonucleoside derivative with an α/β ratio of 1.25/1. The β isomer was purified by flash column chromatography. The removal of protecting groups on the sugar afforded 1-(5-bromo-2,6-dimethoxypyridin-3-yl)-β-D-ribofuranose. Attempts for demethylation were unsuccessful possibly due to the instability of 1-deazauridine. In summary, we have established a feasible pathway for the synthesis of 1-deazauridine derivatives.

    目錄…………………………………………….……….……………..i 縮寫對照表…………………………………………….……………..iii 英文摘要……………………………………………….……………..iv 中文摘要………………………………………….………………..…v 第一章 緒論…………………………………….……………..……1 第二章 6-Cyano-1,3-dimethyluracil 與親核試劑的反應: 作為 6-CN-UMP 的化學反應模型 2-1 前言…………………………………………………………….12 2-2 實驗的設計與概念…………………………………………….17 2-3 結果與討論…………………………………………………….19 2-4 結論…………………………………………………………….26 第三章 合成1-Deazauridine 3-1 前言…………………………………………………………….27 3-2 實驗的設計與概念…………………………………………….30 3-3 結果與討論 3-3-1醣的保護基製備………………………………...……………35 3-3-2 鹼基的製備…………...……………………………………..36 3-3-3 合成1-Deazauridine...…………………………...…………..38 3-3-4 化合物 3-45 結構鑑定.........................................................42 3-4 結論………………………………...………………………….47 第四章 合成1-Deazaorotidine 4-1 前言……………………………………………..……………..48 4-2 實驗的設計與概念……………………………..……………..50 4-3 結果與討論…………………………………..………………..52 4-4 結論……………………………………………..……………..55 第五章 總結……………………………………..……..……….…..56 第六章 儀器設備、實驗步驟與光譜數據…………………...……58 參考文獻……………………………………………....…………….71 光譜資料………………………………………………....………….76

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