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研究生: 謝慧齡
Huei-Ling Hsieh
論文名稱: 蕃茄果實內TF15蛋白質的基因選殖與其表現分析之研究
Molecular cloning the gene encoding tomato TF15 protein and characterization of its expression
指導教授: 王玉麒
Wang, Yu-Chie
學位類別: 碩士
Master
系所名稱: 生命科學系
Department of Life Science
畢業學年度: 87
語文別: 中文
論文頁數: 152
中文關鍵詞: 蕃茄基因選殖TF15蛋白質ASR1蛋白質
論文種類: 學術論文
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  • 本研究觀察到在蕃茄果實中除了polygalacturonase及pectin methylesterase兩個主要表現的酵素之外,另有一分子量15 kDa的蛋白質其表現量亦極為顯著。由於該蛋白質的生物功能至今不詳,在此將其命名為Tomato fruit 15-kDa protein,並簡稱為TF15蛋白質。
    TF15蛋白質普遍存在於各不同品系的蕃茄果實內,且於各不同發育時期皆有表現。為了選殖TF15蛋白質的生合成基因,本研究製備了蕃茄果實的cDNA library,並藉專一抗體從中選殖出HL4及HL5兩個cDNA clones。其中HL5全長為740 bp,內含一個333 bp的完整讀序,並可轉譯出110個氨基酸。TF15蛋白質的氨基酸序列中以His、Glu、Lys等三個氨基酸的含量最為豐富,分別佔全部氨基酸的19.09 %、17.27 % 及16.36 %。在該蛋白質中親水性氨基酸與疏水性氨基酸以短片段長度重複鑲嵌,形成a-helix的二級結構。在基因庫內進行比對的結果,發現TF15蛋白質與前人報導的ASR蛋白質 (Iusem et al., 1993) 有顯著的相似性。
    相較於植株的根、莖、葉片等器官,TF15蛋白質在蕃茄植株中主要表現於果實部位。此外,TF15蛋白質也會受到PEG滲透逆境或ABA的處理而有短暫性之輕微誘導表現。蕃茄果實在以1 % Ethephon進行人工催熟時,TF15蛋白質的表現量並不隨著Ethephon處理時間的增加而有所改變。且無論是對乙烯不敏感的Never Ripe突變種或是對乙烯敏感的亞蔬CL5915-93D4-1-0-3品種,其果實內TF15蛋白質的表現量均為一致,故推論TF15蛋白質的表現不受荷爾蒙乙烯的影響。此外,雖然TF15蛋白質之基因表現量會隨著果實的成熟而有逐漸增加的趨勢,但其蛋白質表現量卻在果實發育至MG時期後,即已臻穩定狀態,此一結果顯示在蕃茄果實中,TF15蛋白質的生合成基因之表現,可能在post-transcriptional的層次上具有調控的機制。

    In this study, we observed in tomato fruit the presence of a predominant 15-kDa protein, in addition to polygalacturonase and pectin methylesterase. Since the biological function of this protein is not yet known, here we named it as tomato fruit 15-kDa protein (TF15 protein).
    TF15 protein can be detected in tomato fruits from various cultivars and of different developmental stages. To identify its encoding gene, we have constructed a tomato fruit cDNA library and selected from it two positive clones, HL4 and HL5, using an antiserum directed to the TF15 protein. The HL5 clone is 740 base pairs in length and contains an open reading frame encoding a polypeptide of 110 amino acids. The translated polypeptide is rich in His (19%), Glu (17%), and Lys (16%). Beside, the hydrophilic and hydrophobic amino acids within this polypeptide are present as intervened segments, suggesting the existence of an a-helix secondary structure. The result of a protein database search indicates the TF15 protein is high homologous to the ASR protein (Iusem et al., 1993).
    Comparative to its levels in the root, stem, and leaves of tomato plant, TF15 protein is mainly expressed in the fruit. In the stem, however, the expression of TF15 protein may be transiently and slightly induced by PEG or ABA treatment. While Ethephon treatment lead tomato fruits of mature-green stage to ripened, the level of TF15 protein in these fruits remained unchanged. In addition, the levels of TF15 protein in both ethylene-sensitive (AVDRC CL5915-93D4-1-0-3) and ethylene-insensitive (Never ripe) tomato fruits were indistinguishable. These results indicate the expression of TF15 protein is not ethylene-stimulated. In ripening tomato fruits, the expression patterns of TF15 protein and its RNA transcript are distinct. For the former, the protein level has reached a steady state when fruits are at mature-green stage; while for the latter, the RNA level remains increasing along the ripening process. These data suggest the expression of TF15 protein and its encoding gene may be regulated at the post-transcriptinal level.

    目 錄 壹、緒論 1 重組蛋白質的生產 1 基因轉殖植物的應用 3 蕃茄的應用 5 蕃茄果實內已知基因與蛋白質之表現 7 蕃茄果實中主要表現的酵素以及專一表現於蕃茄 果實內的基因 7 乙烯引起的蛋白質表現 9 研究目的 10 貳、研究材料與方法 12 一、研究材料與蕃茄植株的種植 12 1. 材料 12 2. 蕃茄植株的種植 13 3. 蕃茄果實的發育界定與樣品之收集 13 4. 蕃茄植株的水耕栽培及polyethylene glycol (PEG) 與abscisic acid (ABA) 的處理 15 二、蛋白質的分析 16 1. 研磨緩衝液的選擇 16 2. 蛋白質的萃取與濃縮 16 3. 蛋白質電泳分析 17 4. 蛋白質的銀染 18 5. Coomassie brilliant blue的染色 19 6. 蕃茄果實內蛋白質的定量 19 7. TF15蛋白質的電泳釋出 (electroelution) 20 8. 等焦電泳分析 21 9. 免疫轉漬 (immunoblotting) 試驗 23 三、TF15蛋白質微定序分析 (microsequencing) 25 四、TF15蛋白質多株抗體之製備 25 1. 免疫注射 25 2. 多株抗體血清之分離 26 五、蕃茄果實人工催熟處理 27 六、TF15蛋白質的基因選殖 28 1. Total RNA之萃取 28 2. mRNA的純化 29 3. RNA的電泳分析: 32 4. cDNA library之構築 33 5. cDNA library之免疫篩選 42 6. 細菌的轉型作用 (transformation) 45 7. 純化噬菌體DNA 46 8. DNA電泳分析 48 9. 純化細菌質體DNA-鹼性溶菌法 (alkaline lysis) 之小量純化 (mini prep) 49 10. 純化細菌質體DNA:鹼性溶菌法 (alkaline lysis) 之大量純化 (large prep) 50 七、北方轉漬法 (Northern blotting) 53 1. 探針的製作 53 2. 北方轉漬分析 55 參、研究結果 58 蕃茄果實內蛋白質的萃取 58 蕃茄果實發育期間TF15蛋白質表現情形的初探 59 TF15蛋白質的純化 60 TF15蛋白質的微定序分析 60 TF15蛋白質之多株抗體生產與其效價測定 (titer determination) 61 TF15蛋白質之基因選殖 62 蕃茄果實細胞RNA的萃取與mRNA的純化 62 蕃茄果實cDNA library的建構與篩選 63 蕃茄果實內TF15蛋白質之基因序列及其轉譯 氨基酸序列之分析 65 TF15蛋白質的表現分析 66 TF15蛋白質在蕃茄懸浮培養細胞與植株內的表現 情形 66 TF15蛋白質在不同蕃茄果實組織的表現情形 67 TF15蛋白質在不利環境下的表現情形 67 蕃茄果實發育時期TF15蛋白質及其RNA表現之 再探 68 乙烯與TF15蛋白質表現關係 69 肆、討論 71 蕃茄果實內蛋白質表現之探討與目標蛋白質的選擇 71 TF15蛋白質生合成基因的選殖 74 核酸探針及多株抗體的製作 74 cDNA library的建構 75 TF15核酸序列及氨基酸序列之分析 76 TF15蛋白質的表現分析 78 TF15蛋白質生物功能之探測 80 總結… 82 伍、參考文獻 84 陸、圖表 100 附錄一、Schenk-Hildebrandt (SH) medium 133 附錄二、Modified Hoagland's solution 134

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